Transcriptome analysis of the grape-Elsinoë ampelina pathosystem reveals pathogenesis of E. ampelina associated with novel effectors and pathogenicity-related genes and defensive strategies of grapevine.
Identifieur interne : 000014 ( Main/Exploration ); précédent : 000013; suivant : 000015Transcriptome analysis of the grape-Elsinoë ampelina pathosystem reveals pathogenesis of E. ampelina associated with novel effectors and pathogenicity-related genes and defensive strategies of grapevine.
Auteurs : Zhi Li [République populaire de Chine] ; Ya Wang [Oman] ; Yan Chun Fan [Oman] ; Bilal Ahmad [République populaire de Chine] ; Xianhang Wang [République populaire de Chine] ; Songlin Zhang [Oman] ; Yanxun Zhu [République populaire de Chine] ; Lin Lin Gao [République populaire de Chine] ; Ping Ping Chang [République populaire de Chine] ; Xiping Wang [République populaire de Chine]Source :
- Molecular plant-microbe interactions : MPMI [ 0894-0282 ] ; 2020.
Abstract
Elsinoë ampelina is an ascomycetous fungus that causes grape anthracnose, a potentially devastating disease worldwide. In this study, a dual RNA-seq analysis was used to simultaneously monitor the fungal genes related to pathogenesis and grape genes related to defence during the interaction at 2, 3, 4, and 5 days post inoculation (dpi). Consistent with their potential roles in pathogenicity, genes for carbohydrate-active enzymes, secondary metabolites synthesis, pathogen-host interaction and those encoding secreted proteins are upregulated during infection. Based on Agrobacterium tumefaciens-mediated transient assays in Nicotiana benthamiana, we further showed that eight and nine candidate effectors suppressed BAX- and INF1-mediated programmed cell death, respectively. The host response was characterized by the induction multiple defense systems against E. ampelina, including synthesis of phenylpropanoids, stilbenes, and terpenoids biosynthesis, cell wall modifications, regulation by phytohormones, and expression of defense related genes. Together, these findings offer new insights into the molecular mechanisms underlying the grape-E. ampelina interaction.
DOI: 10.1094/MPMI-08-20-0227-R
PubMed: 33006532
Affiliations:
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lizhi@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Horticulture, Taicheng Road No. 3, Yangling, China</wicri:regionArea><wicri:noRegion>China</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Ya" sort="Wang, Ya" uniqKey="Wang Y" first="Ya" last="Wang">Ya Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; wangya526173087@126.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Fan, Yan Chun" sort="Fan, Yan Chun" uniqKey="Fan Y" first="Yan Chun" last="Fan">Yan Chun Fan</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Forestry, Yangling, Shaanxi, China; fanyanchun666@163.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Forestry, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Ahmad, Bilal" sort="Ahmad, Bilal" uniqKey="Ahmad B" first="Bilal" last="Ahmad">Bilal Ahmad</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; bajwa1999@nwafu.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Xianhang" sort="Wang, Xianhang" uniqKey="Wang X" first="Xianhang" last="Wang">Xianhang Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; wangxianhang@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Songlin" sort="Zhang, Songlin" uniqKey="Zhang S" first="Songlin" last="Zhang">Songlin Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; 18821636061@163.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhu, Yanxun" sort="Zhu, Yanxun" uniqKey="Zhu Y" first="Yanxun" last="Zhu">Yanxun Zhu</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; yanxun.zhu@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Gao, Lin Lin" sort="Gao, Lin Lin" uniqKey="Gao L" first="Lin Lin" last="Gao">Lin Lin Gao</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi, China; gaolinlin@nwafu.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Chang, Ping Ping" sort="Chang, Ping Ping" uniqKey="Chang P" first="Ping Ping" last="Chang">Ping Ping Chang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi, China; changpingping@nwafu.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Xiping" sort="Wang, Xiping" uniqKey="Wang X" first="Xiping" last="Wang">Xiping Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, No.3, Taicheng Road, Yangling, China, 712100; wangxiping@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, No.3, Taicheng Road, Yangling, China</wicri:regionArea><wicri:noRegion>China</wicri:noRegion></affiliation></author></analytic><series><title level="j">Molecular plant-microbe interactions : MPMI</title><idno type="ISSN">0894-0282</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Elsinoë ampelina is an ascomycetous fungus that causes grape anthracnose, a potentially devastating disease worldwide. In this study, a dual RNA-seq analysis was used to simultaneously monitor the fungal genes related to pathogenesis and grape genes related to defence during the interaction at 2, 3, 4, and 5 days post inoculation (dpi). Consistent with their potential roles in pathogenicity, genes for carbohydrate-active enzymes, secondary metabolites synthesis, pathogen-host interaction and those encoding secreted proteins are upregulated during infection. Based on Agrobacterium tumefaciens-mediated transient assays in Nicotiana benthamiana, we further showed that eight and nine candidate effectors suppressed BAX- and INF1-mediated programmed cell death, respectively. The host response was characterized by the induction multiple defense systems against E. ampelina, including synthesis of phenylpropanoids, stilbenes, and terpenoids biosynthesis, cell wall modifications, regulation by phytohormones, and expression of defense related genes. Together, these findings offer new insights into the molecular mechanisms underlying the grape-E. ampelina interaction.</div></front></TEI><pubmed><MedlineCitation Status="Publisher" Owner="NLM"><PMID Version="1">33006532</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0894-0282</ISSN><JournalIssue CitedMedium="Print"><PubDate><Year>2020</Year><Month>Oct</Month><Day>02</Day></PubDate></JournalIssue><Title>Molecular plant-microbe interactions : MPMI</Title><ISOAbbreviation>Mol Plant Microbe Interact</ISOAbbreviation></Journal><ArticleTitle>Transcriptome analysis of the grape-Elsinoë ampelina pathosystem reveals pathogenesis of E. ampelina associated with novel effectors and pathogenicity-related genes and defensive strategies of grapevine.</ArticleTitle><ELocationID EIdType="doi" ValidYN="Y">10.1094/MPMI-08-20-0227-R</ELocationID><Abstract><AbstractText>Elsinoë ampelina is an ascomycetous fungus that causes grape anthracnose, a potentially devastating disease worldwide. In this study, a dual RNA-seq analysis was used to simultaneously monitor the fungal genes related to pathogenesis and grape genes related to defence during the interaction at 2, 3, 4, and 5 days post inoculation (dpi). Consistent with their potential roles in pathogenicity, genes for carbohydrate-active enzymes, secondary metabolites synthesis, pathogen-host interaction and those encoding secreted proteins are upregulated during infection. Based on Agrobacterium tumefaciens-mediated transient assays in Nicotiana benthamiana, we further showed that eight and nine candidate effectors suppressed BAX- and INF1-mediated programmed cell death, respectively. The host response was characterized by the induction multiple defense systems against E. ampelina, including synthesis of phenylpropanoids, stilbenes, and terpenoids biosynthesis, cell wall modifications, regulation by phytohormones, and expression of defense related genes. Together, these findings offer new insights into the molecular mechanisms underlying the grape-E. ampelina interaction.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Zhi</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Horticulture, Taicheng Road No. 3, Yangling, China, 712100; lizhi@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Ya</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; wangya526173087@126.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fan</LastName><ForeName>Yan Chun</ForeName><Initials>YC</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Forestry, Yangling, Shaanxi, China; fanyanchun666@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ahmad</LastName><ForeName>Bilal</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; bajwa1999@nwafu.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Xianhang</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; wangxianhang@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Songlin</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; 18821636061@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhu</LastName><ForeName>Yanxun</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, Yangling, Shaanxi, China; yanxun.zhu@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gao</LastName><ForeName>Lin Lin</ForeName><Initials>LL</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi, China; gaolinlin@nwafu.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chang</LastName><ForeName>Ping Ping</ForeName><Initials>PP</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Horticulture, Yangling, Shaanxi, China; changpingping@nwafu.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Xiping</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, No.3, Taicheng Road, Yangling, China, 712100; wangxiping@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>10</Month><Day>02</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Mol Plant Microbe Interact</MedlineTA><NlmUniqueID>9107902</NlmUniqueID><ISSNLinking>0894-0282</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>10</Month><Day>2</Day><Hour>12</Hour><Minute>8</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>10</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>10</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>aheadofprint</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">33006532</ArticleId><ArticleId IdType="doi">10.1094/MPMI-08-20-0227-R</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Oman</li><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Li, Zhi" sort="Li, Zhi" uniqKey="Li Z" first="Zhi" last="Li">Zhi Li</name></noRegion><name sortKey="Ahmad, Bilal" sort="Ahmad, Bilal" uniqKey="Ahmad B" first="Bilal" last="Ahmad">Bilal Ahmad</name><name sortKey="Chang, Ping Ping" sort="Chang, Ping Ping" uniqKey="Chang P" first="Ping Ping" last="Chang">Ping Ping Chang</name><name sortKey="Gao, Lin Lin" sort="Gao, Lin Lin" uniqKey="Gao L" first="Lin Lin" last="Gao">Lin Lin Gao</name><name sortKey="Wang, Xianhang" sort="Wang, Xianhang" uniqKey="Wang X" first="Xianhang" last="Wang">Xianhang Wang</name><name sortKey="Wang, Xiping" sort="Wang, Xiping" uniqKey="Wang X" first="Xiping" last="Wang">Xiping Wang</name><name sortKey="Zhu, Yanxun" sort="Zhu, Yanxun" uniqKey="Zhu Y" first="Yanxun" last="Zhu">Yanxun Zhu</name></country><country name="Oman"><noRegion><name sortKey="Wang, Ya" sort="Wang, Ya" uniqKey="Wang Y" first="Ya" last="Wang">Ya Wang</name></noRegion><name sortKey="Fan, Yan Chun" sort="Fan, Yan Chun" uniqKey="Fan Y" first="Yan Chun" last="Fan">Yan Chun Fan</name><name sortKey="Zhang, Songlin" sort="Zhang, Songlin" uniqKey="Zhang S" first="Songlin" last="Zhang">Songlin Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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